[GENERAL]
AmountOfChains=2
ChainLibrary=fattyAcidChains.xlsx
CAtomsFromName=\D*(\d+):\d+
DoubleBondsFromName=\D*\d+:(\d+)
SpectrumCoverage=10%
BasePeakCutoff=0.01%
ChainCutoff=90%
AlkenylChains=1
SpectrumCoverage=10%
RetentionTimePostprocessing=true
SingleChainIdentification=true


[HEAD]
!FRAGMENTS
Name=Precursor		Formula=$PRECURSOR		Charge=1	MSLevel=2	mandatory=other
Name=PC O-(307)		Formula=C21H39O			Charge=1	MSLevel=2	mandatory=true
Name=-PC O-(59)		Formula=$PRECURSOR-C3H9N	Charge=1	MSLevel=2	mandatory=true
Name=-PC O-(183)	Formula=$PRECURSOR-C5H14NO4P	Charge=1	MSLevel=2	mandatory=true
Name=-PC O-(205)	Formula=$PRECURSOR-C5H13NO4PNa	Charge=1	MSLevel=2	mandatory=false
Name=PC O-(184)		Formula=C5H15NO4P		Charge=1	MSLevel=2	mandatory=other

!INTENSITIES
Equation=-PC O-(59)>0.25*$BASEPEAK		mandatory=true
Equation=-PC O-(59)>Precursor			mandatory=true
Equation=-PC O-(59)>PC O-(184)			mandatory=true
Equation=-PC O-(59)>-PC O-(183)+-PC O-(205)	mandatory=true


[CHAINS]
!FRAGMENTS
Name=-FA (+ONa)		Formula=$PRECURSOR-$CHAIN-Na+H		Charge=1	MSLevel=2	mandatory=true
Name=-FA (+H)		Formula=$PRECURSOR-$ALKENYLCHAIN	Charge=1	MSLevel=2	mandatory=false

!INTENSITIES
Equation=-FA (+ONa)*4>PC O-(307)	mandatory=true


[POSITION]
!INTENSITIES
Equation=-FA (+ONa)[2]>0*-FA (+H)[2]+0*$BASEPEAK	mandatory=true


