[GENERAL]
AmountOfChains=2
ChainLibrary=fattyAcidChains.xlsx
CAtomsFromName=\D*(\d+):\d+
DoubleBondsFromName=\D*\d+:(\d+)
BasePeakCutoff=0.01%
AlkenylChains=1
ChainCutoff=30%
RetentionTimePostprocessing=true
SingleChainIdentification=true
SpectrumCoverage=10%


[HEAD]
!FRAGMENTS
Name=-PC O-(60)		Formula=$PRECURSOR-C2O2H4	Charge=1	MSLevel=2	mandatory=true
Name=Precursor		Formula=$PRECURSOR		Charge=1	MSLevel=2	mandatory=other
Name=-PS(87)		Formula=$PRECURSOR-C3H5NO2	Charge=1	MSLevel=2	mandatory=other
Name=-LPC(285)  	Formula=$PRECURSOR-C9H20O7P1N1	Charge=1	MSLevel=2	mandatory=other

!INTENSITIES
Equation=-PC O-(60)>$BASEPEAK*0.6	mandatory=true
Equation=-PS(87)<-PC O-(60)*0.002	mandatory=true
Equation=-LPC(285)<-PC O-(60)*0.002	mandatory=true
Equation=Precursor<0.25*$BASEPEAK	mandatory=true


[CHAINS]
!FRAGMENTS
Name=FA (+O)		Formula=$CHAIN-H			Charge=1	MSLevel=2	mandatory=true
Name=FA			Formula=$ALKENYLCHAIN-H			Charge=1	MSLevel=2	mandatory=false

!INTENSITIES
Equation=FA (+O)*0.5>FA		mandatory=true


[POSITION]
!INTENSITIES
Equation=FA (+O)[2]>0*FA[2]+0*$BASEPEAK			mandatory=true